Differential effects on enzyme stability and kinetic parameters of mutants related to human triosephosphate isomerase deficiency.


Abstract

Human triosephosphate isomerase (TIM) deficiency is a very rare disease, but there are several mutations reported to be causing the illness. In this work, we produced nine recombinant human triosephosphate isomerases which have the mutations reported to produce TIM deficiency. These enzymes were characterized biophysically and biochemically to determine their kinetic and stability parameters, and also to substitute TIM activity in supporting the growth of an Escherichia coli strain lacking the tim gene. Our results allowed us to rate the deleteriousness of the human TIM mutants based on the type and severity of the alterations observed, to classify four "unknown severity mutants" with altered residues in positions 62, 72, 122 and 154 and to explain in structural terms the mutation V231M, the most affected mutant from the kinetic point of view and the only homozygous mutation reported besides E104D.

Submission Details

ID: uiAUwBD64

Submitter: Shu-Ching Ou

Submission Date: Jan. 17, 2019, 3:27 p.m.

Version: 1

Publication Details
Cabrera N;Torres-Larios A;García-Torres I;Enríquez-Flores S;Perez-Montfort R,Biochim Biophys Acta Gen Subj (2018) Differential effects on enzyme stability and kinetic parameters of mutants related to human triosephosphate isomerase deficiency. PMID:29571745
Additional Information

C41->C43, A62->A64, G72->G74, E104->E106, G122->G124, V154->V156, I170->I172, V231->V233, F240->F242

Structure view and single mutant data analysis

Study data

No weblogo for data of varying length.
Colors: D E R H K S T N Q A V I L M F Y W C G P
 

Data Distribution

Studies with similar sequences (approximate matches)

Correlation with other assays (exact sequence matches)


Relevant UniProtKB Entries

Percent Identity Matching Chains Protein Accession Entry Name
200.0 A,B Triosephosphate isomerase P60174 TPIS_HUMAN
200.0 A,B Triosephosphate isomerase P60175 TPIS_PANTR
198.4 A,B Triosephosphate isomerase Q60HC9 TPIS_MACFA
198.4 A,B Triosephosphate isomerase P15426 TPIS_MACMU
198.4 A,B Triosephosphate isomerase Q2QD07 TPIS_GORGO
199.2 A,B Triosephosphate isomerase Q5R928 TPIS_PONAB
196.8 A,B Triosephosphate isomerase P00939 TPIS_RABIT
196.8 A,B Triosephosphate isomerase P54714 TPIS_CANLF
195.2 A,B Triosephosphate isomerase Q5E956 TPIS_BOVIN
192.0 A,B Triosephosphate isomerase P17751 TPIS_MOUSE
188.8 A,B Triosephosphate isomerase P48500 TPIS_RAT
187.0 A,B Triosephosphate isomerase Q29371 TPIS_PIG
180.4 A,B Triosephosphate isomerase P00940 TPIS_CHICK