Triad DDG Calculations with Phoenix for 2GI9
Abstract
Use the triad software to calculated the DDG of unfolding for 2GI9 with the phoenix score function
Submission Details
ID: cymFhTUN3
Submitter: Connie Wang
Submission Date: July 31, 2017, 11:46 a.m.
Version: 1
Publication Details
Wang Connie (2017-04-05) Triad DDG Calculations with Phoenix for 2GI9; unpublished work from Protabit groupAdditional Information
Study Summary
| Number of data points | 556220 |
| Proteins | Immunoglobulin G-binding protein G |
| Unique complexes | 556220 |
| Assays/Quantities/Protocols | Computational Protocol: Single Mutant DDG ; Computational Protocol: Double Mutant DDG |
| Libraries | Single Mutants ; Double mutants |
Structure view and single mutant data analysis
Study data
| Colors: | D | E | R | H | K | S | T | N | Q | A | V | I | L | M | F | Y | W | C | G | P |
|---|
Data Distribution
Studies with similar sequences (approximate matches)
Correlation with other assays (exact sequence matches)
Relevant PDB Entries
| Structure ID | Release Date | Resolution | Structure Title |
|---|---|---|---|
| 1EM7 | 2000-03-16T00:00:00+0000 | 2.0 | HELIX VARIANT OF THE B1 DOMAIN FROM STREPTOCOCCAL PROTEIN G |
| 1GB1 | 1991-05-15T00:00:00+0000 | 0 | A NOVEL, HIGHLY STABLE FOLD OF THE IMMUNOGLOBULIN BINDING DOMAIN OF STREPTOCOCCAL PROTEIN G |
| 1IGC | 1994-08-05T00:00:00+0000 | 2.6 | IGG1 FAB FRAGMENT (MOPC21) COMPLEX WITH DOMAIN III OF PROTEIN G FROM STREPTOCOCCUS |
| 1IGD | 1994-08-05T00:00:00+0000 | 1.1 | THE THIRD IGG-BINDING DOMAIN FROM STREPTOCOCCAL PROTEIN G: AN ANALYSIS BY X-RAY CRYSTALLOGRAPHY OF THE STRUCTURE ALONE AND IN A COMPLEX WITH FAB |
| 1LE3 | 2002-04-09T00:00:00+0000 | 0 | NMR Structure of Tryptophan Zipper 4: A Stable Beta-Hairpin Peptide Based on the C-terminal Hairpin of the B1 Domain of Protein G |
| 1MPE | 2002-09-12T00:00:00+0000 | 0 | Ensemble of 20 structures of the tetrameric mutant of the B1 domain of streptococcal protein G |
| 1MVK | 2002-09-25T00:00:00+0000 | 2.5 | X-ray structure of the tetrameric mutant of the B1 domain of streptococcal protein G |
| 1PGA | 1993-11-23T00:00:00+0000 | 2.07 | TWO CRYSTAL STRUCTURES OF THE B1 IMMUNOGLOBULIN-BINDING DOMAIN OF STREPTOCOCCAL PROTEIN G AND COMPARISON WITH NMR |
| 1PGB | 1993-11-23T00:00:00+0000 | 1.92 | TWO CRYSTAL STRUCTURES OF THE B1 IMMUNOGLOBULIN-BINDING DOMAIN OF STREPTOCCOCAL PROTEIN G AND COMPARISON WITH NMR |
| 1PGX | 1992-04-03T00:00:00+0000 | 1.66 | THE 1.66 ANGSTROMS X-RAY STRUCTURE OF THE B2 IMMUNOGLOBULIN-BINDING DOMAIN OF STREPTOCOCCAL PROTEIN G AND COMPARISON TO THE NMR STRUCTURE OF THE B1 DOMAIN |