Destabilizing effects of replacing a surface lysine of cytochrome c with aromatic amino acids: implications for the denatured state.


Abstract

A series of mutations at the highly solvent-exposed lysine 73 of iso-1-cytochrome c have been prepared by site-directed mutagenesis. These mutations were designed to probe denatured-state effects on the unfolding equilibrium of this protein. The hydrophilic amino acid Lys was replaced with the hydrophobic amino acids Met, Tyr, Phe, and Trp. The idea was to induce stabilizing hydrophobic interactions in the unfolded state, while having little effect on the folded-state energy due to the high solvent exposure of this site. Fourier transform infrared spectral analyses indicate that none of these mutations significantly affect the native fold of the protein. The stability of each protein to guanidine hydrochloride denaturation was monitored at 25 degrees C by circular dichroism spectroscopy. All four hydrophobic mutants decreased the value of delta Go uH2O, the free energy of unfolding of the protein in the absence of denaturant, by 1.0-1.5 kcal/mol. The delta Go uH2O values for these proteins correlate linearly (correlation coefficient of 0.98) with the hydrophobicity of the amino acid at position 73 of the sequence. These data are consistent with the idea that the position-73 mutants are more buried in the denatured state than in the native state, suggestive of a compact denatured state where such interactions would be possible. Study holds ProTherm entries: 277, 278, 279, 280, 281 Extra Details: site-directed mutagenesis; destabilizing effects; stability;,hydrophobic interactions; unfolding equilibrium

Submission Details

ID: YkYwzZBf3

Submitter: Connie Wang

Submission Date: April 24, 2018, 8:14 p.m.

Version: 1

Publication Details
Bowler BE;May K;Zaragoza T;York P;Dong A;Caughey WS,Biochemistry (1993) Destabilizing effects of replacing a surface lysine of cytochrome c with aromatic amino acids: implications for the denatured state. PMID:8380333
Additional Information

Structure view and single mutant data analysis

Study data

No weblogo for data of varying length.
Colors: D E R H K S T N Q A V I L M F Y W C G P
 

Data Distribution

Studies with similar sequences (approximate matches)

Correlation with other assays (exact sequence matches)


Relevant UniProtKB Entries

Percent Identity Matching Chains Protein Accession Entry Name
100.0 Cytochrome c P00025 CYC_KATPE
98.1 Cytochrome c P81459 CYC_THUAA
93.3 Cytochrome c Q6IQM2 CYC_DANRE
90.4 Cytochrome c Q4SG99 CYC_TETNG
92.3 Cytochrome c P00026 CYC_CYPCA