Investigation of the structural basis for thermostability of DNA-binding protein HU from Bacillus stearothermophilus.


Abstract

Site-directed mutagenesis was used to identify amino acid residues essential for the thermostability of the DNA-binding protein HU from the thermophile Bacillus stearothermophilus (BstHU). Two mutants, BstHU-A27S and BstHU-V42I, in which Ala27 and Val42 in BstHU were replaced by the corresponding amino acids Ser27 and Ile42, respectively, in the homologue from a mesophile B. subtilis (BsuHU), were less stable than the wild-type BstHU (63.9 degreesC), showing Tm values of 58.4 degreesC and 60.1 degreesC, respectively, as estimated by circular dichroism (CD) analysis at pH 7.0. The denaturation of two mutants was further characterized using differential scanning calorimetry; the Tm values obtained by calorimetric analysis were in good agreement with those estimated by CD analysis. The results suggest that Ala27 and Val42 are partly responsible for enhancing the thermostability of BstHU. When considered together with previous results, it is revealed that Gly15, Ala27, Glu34, Lys38, and Val42 are essential for the thermostability of thermophilic protein BstHU. Moreover, five thermostabilizing mutations were simultaneously introduced into BsuHU, which resulted in a quintuple mutant with a Tm value of 71.3 degreesC, which is higher than that of BstHU, and also resulted in insusceptibility to proteinase digestion. Study holds ProTherm entries: 3435, 3436, 3437, 3438, 3439, 3440, 3441, 3442, 3443, 3444, 3445, 3446, 3447, 3448, 3449, 3450, 3451, 3452, 3453, 3454, 3455, 14224, 14225, 14226, 14227, 14228, 14229, 14230, 14231, 14232, 14233 Extra Details: Thermophilic protein thermostability; DNA-binding protein HU; structural;,Bacillus stearothermophilus

Submission Details

ID: KrnxaPwv3

Submitter: Connie Wang

Submission Date: April 24, 2018, 8:21 p.m.

Version: 1

Publication Details
Kawamura S;Abe Y;Ueda T;Masumoto K;Imoto T;Yamasaki N;Kimura M,J. Biol. Chem. (1998) Investigation of the structural basis for thermostability of DNA-binding protein HU from Bacillus stearothermophilus. PMID:9685334
Additional Information

Structure view and single mutant data analysis

Study data

No weblogo for data of varying length.
Colors: D E R H K S T N Q A V I L M F Y W C G P
 

Data Distribution

Studies with similar sequences (approximate matches)

Correlation with other assays (exact sequence matches)


Relevant PDB Entries

Structure ID Release Date Resolution Structure Title
1HUE 1995-10-15 HISTONE-LIKE PROTEIN
1HUU 1999-01-13 2.0 DNA-BINDING PROTEIN HU FROM BACILLUS STEAROTHERMOPHILUS

Relevant UniProtKB Entries

Percent Identity Matching Chains Protein Accession Entry Name
100.0 DNA-binding protein HU P0A3H0 DBH_GEOSE
100.0 DNA-binding protein HU P0A3H1 DBH_BACCL
100.0 DNA-binding protein HU P0A3H2 DBH_BACCA
100.0 DNA-binding protein HU 1 P08821 DBH1_BACSU