On the relationship between protein stability and folding kinetics: a comparative study of the N-terminal domains of RNase HI, E. coli and Bacillus stearothermophilus L9.


Abstract

There is currently a great deal of interest in proteins that fold in a single highly cooperative step. Particular attention has been focused on elucidating the factors that govern folding rates of simple proteins. Recently, the topology of the native state has been proposed to be the most important determinant of their folding rates. Here we report a comparative study of the folding of three topologically equivalent proteins that adapt a particularly simple alpha/beta fold. The folding kinetics of the N-terminal domain of RNase HI and the N-terminal domain of the ribosomal protein L9 from Escherichia coli (eNTL9) were compared to the previously characterized N-terminal domain of L9 from Bacillus stearothermophilus (bNTL9). This 6.2 kDa protein, which is one of simplest examples of the ABCalphaD motif, folds via a two-state mechanism on the millisecond to submillisecond time scale. The RNase HI domain and bNTL9 have very similar tertiary structures but there is little similarity in primary sequence. bNTL9 and eNTL9 share the same biological function and a similar primary sequence but differ significantly in stability. Fluorescence-detected stopped-flow experiments showed that the three proteins fold in a two-state fashion. The folding rates in the absence of denaturant were found to be very different, ranging form 21 s(-1) to 790 s(-1) at 10 degrees C. The diverse folding rates appear to reflect large differences in the stability of the proteins. When compared at an isostability point, the folding rates converged to a similar value and there is a strong linear correlation between the log of the folding rate and stability for this set of proteins. These observations are consistent with the idea that stability can play an important role in dictating relative folding rates among topologically equivalent proteins. Study holds ProTherm entries: 12224, 12225, 12226 Extra Details: protein folding; contact order; protein stability; ribosomal protein L9

Submission Details

ID: JcJAFcop

Submitter: Connie Wang

Submission Date: April 24, 2018, 8:43 p.m.

Version: 1

Publication Details
Sato S;Xiang S;Raleigh DP,J. Mol. Biol. (2001) On the relationship between protein stability and folding kinetics: a comparative study of the N-terminal domains of RNase HI, E. coli and Bacillus stearothermophilus L9. PMID:11563917
Additional Information

Study Summary

Structure view and single mutant data analysis

Study data

No weblogo for data of varying length.
Colors: D E R H K S T N Q A V I L M F Y W C G P
 

Data Distribution

Studies with similar sequences (approximate matches)

Correlation with other assays (exact sequence matches)


Relevant PDB Entries

Structure ID Release Date Resolution Structure Title
1B75 2000-01-26 SOLUTION STRUCTURE OF RIBOSOMAL PROTEIN L25 FROM ESCHERICHIA COLI
2JQ7 2007-07-03 Model for thiostrepton binding to the ribosomal L11-RNA
1OLN 2003-09-11 Model for thiostrepton antibiotic binding to L11 substrate from 50S ribosomal RNA
1CQU 2002-04-27 SOLUTION STRUCTURE OF THE N-TERMINAL DOMAIN OF RIBOSOMAL PROTEIN L9
1D6K 1999-11-22 NMR SOLUTION STRUCTURE OF THE 5S RRNA E-LOOP/L25 COMPLEX
2K3F 2008-06-17 Ribosomal protein L11 from Thermotoga maritima
2HBA 2007-05-29 1.25 Crystal Structure of N-terminal Domain of Ribosomal Protein L9 (NTL9) K12M
4REO 2015-03-18 1.35 Mutant ribosomal protein l1 from thermus thermophilus with threonine 217 replaced by valine
4F9T 2012-08-08 1.46 Ribosomal protein L1 from Thermus thermophilus with substitution Thr217Ala
1WHI 1996-08-17 1.5 RIBOSOMAL PROTEIN L14
2HVF 2007-06-12 1.57 Crystal Structure of N-terminal Domain of Ribosomal Protein L9 (NTL9), G34dA
1DFU 1999-12-02 1.8 CRYSTAL STRUCTURE OF E.COLI RIBOSOMAL PROTEIN L25 COMPLEXED WITH A 5S RRNA FRAGMENT AT 1.8 A RESOLUTION
2HBB 2007-05-29 1.9 Crystal Structure of the N-terminal Domain of Ribosomal Protein L9 (NTL9)
4QVI 2015-02-11 1.9 Crystal structure of mutant ribosomal protein M218L TthL1 in complex with 80nt 23S RNA from Thermus thermophilus
3UMY 2012-10-31 1.9 Crystal structure of mutant ribosomal protein T217A TthL1 in complex with 80nt 23S RNA from Thermus thermophilus
1AD2 1997-05-15 1.9 RIBOSOMAL PROTEIN L1 MUTANT WITH SERINE 179 REPLACED BY CYSTEINE
3TG8 2011-12-07 1.95 Mutant ribosomal protein L1 lacking ala158 from thermus thermophilus
3BBX 2008-10-21 10.0 The Hsp15 protein fitted into the low resolution Cryo-EM map of the 50S.nc-tRNA.Hsp15 complex
1PN8 2003-07-15 10.8 Coordinates of S12, L11 proteins and E-site tRNA from 70S crystal structure separately fitted into the Cryo-EM map of E.coli 70S.EF-G.GDPNP complex. The atomic coordinates originally from the E-site tRNA were fitted in the position of the hybrid P/E-site tRNA.
1PN7 2003-07-15 10.8 Coordinates of S12, L11 proteins and P-tRNA, from the 70S X-ray structure aligned to the 70S Cryo-EM map of E.coli ribosome
2BCW 2005-12-20 11.2 Coordinates of the N-terminal domain of ribosomal protein L11,C-terminal domain of ribosomal protein L7/L12 and a portion of the G' domain of elongation factor G, as fitted into cryo-em map of an Escherichia coli 70S*EF-G*GDP*fusidic acid complex
1EG0 2000-03-06 11.5 FITTING OF COMPONENTS WITH KNOWN STRUCTURE INTO AN 11.5 A CRYO-EM MAP OF THE E.COLI 70S RIBOSOME
4V48 2014-07-09 11.5 Real space refined coordinates of the 30S and 50S subunits fitted into the low resolution cryo-EM map of the initiation-like state of E. coli 70S ribosome
4V6Q 2014-07-09 11.5 Structural characterization of mRNA-tRNA translocation intermediates (class 5 of the six classes)
4V6R 2014-07-09 11.5 Structural characterization of mRNA-tRNA translocation intermediates (class 6 of the six classes)
4V6Y 2014-07-09 12.0 E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in classic pre-translocation state (pre1a)
4V6Z 2014-07-09 12.0 E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in classic pre-translocation state (pre1b)
4V75 2014-07-09 12.0 E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in classic post-translocation state (post1)
4V6N 2014-07-09 12.1 Structural characterization of mRNA-tRNA translocation intermediates (50S ribosome of class2 of the six classes)
4V47 2014-07-09 12.3 Real space refined coordinates of the 30S and 50S subunits fitted into the low resolution cryo-EM map of the EF-G.GTP state of E. coli 70S ribosome
1MVR 2003-04-01 12.8 Decoding Center & Peptidyl transferase center from the X-ray structure of the Thermus thermophilus 70S ribosome, aligned to the low resolution Cryo-EM map of E.coli 70S Ribosome
4V72 2014-07-09 13.0 E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in hybrid pre-translocation state (pre4)
1MJ1 2002-11-01 13.0 FITTING THE TERNARY COMPLEX OF EF-Tu/tRNA/GTP AND RIBOSOMAL PROTEINS INTO A 13 A CRYO-EM MAP OF THE COLI 70S RIBOSOME
4V6S 2014-07-09 13.1 Structural characterization of mRNA-tRNA translocation intermediates (class 3 of the six classes)
4V6L 2014-07-09 13.2 Structural insights into cognate vs. near-cognate discrimination during decoding.
4V6P 2014-07-09 13.5 Structural characterization of mRNA-tRNA translocation intermediates (class 4b of the six classes)
1ML5 2003-01-14 14.0 Structure of the E. coli ribosomal termination complex with release factor 2
4V6O 2014-07-09 14.7 Structural characterization of mRNA-tRNA translocation intermediates (class 4a of the six classes)
4V4V 2014-07-09 15.0 Structure of a pre-translocational E. coli ribosome obtained by fitting atomic models for RNA and protein components into cryo-EM map EMD-1056
4V4W 2014-07-09 15.0 Structure of a SecM-stalled E. coli ribosome complex obtained by fitting atomic models for RNA and protein components into cryo-EM map EMD-1143
4V73 2014-07-09 15.0 E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in hybrid pre-translocation state (pre5a)
4V79 2014-07-09 15.0 E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post3b)
4V70 2014-07-09 17.0 E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate pre-translocation state (pre3)
4V77 2014-07-09 17.0 E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post2b)
4V74 2014-07-09 17.0 70S-fMetVal-tRNAVal-tRNAfMet complex in hybrid pre-translocation state (pre5b)
4V76 2014-07-09 17.0 E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post2a)
1JQS 2001-09-07 18.0 Fitting of L11 protein and elongation factor G (domain G' and V) in the cryo-em map of E. coli 70S ribosome bound with EF-G and GMPPCP, a nonhydrolysable GTP analog
1JQT 2001-09-07 18.0 Fitting of L11 protein in the low resolution cryo-EM map of E.coli 70S ribosome
1JQM 2001-09-07 18.0 Fitting of L11 protein and elongation factor G (EF-G) in the cryo-em map of e. coli 70S ribosome bound with EF-G, GDP and fusidic acid
1RL6 1999-02-02 2.0 RIBOSOMAL PROTEIN L6
4QG3 2015-02-11 2.0 Crystal structure of mutant ribosomal protein G219V TthL1 in complex with 80nt 23S RNA from Thermus thermophilus
3U4M 2012-08-08 2.0 Crystal structure of ribosomal protein tthl1 in complex with 80nt 23s rna from thermus thermophilus
4YBB 2015-03-18 2.1 High-resolution structure of the Escherichia coli ribosome
6XZ7 2020-07-22 2.1 E. coli 50S ribosomal subunit in complex with dirithromycin, fMet-Phe-tRNA(Phe) and deacylated tRNA(iMet).
3U56 2012-10-31 2.1 Crystal structure of mutant ribosomal protein T217V TthL1 in complex with 80nt 23S RNA from Thermus thermophilus
2HW8 2006-12-19 2.1 Structure of ribosomal protein L1-mRNA complex at 2.1 resolution.
1RL2 1999-04-02 2.3 RIBOSOMAL PROTEIN L2 RNA-BINDING DOMAIN FROM BACILLUS STEAROTHERMOPHILUS
2VPL 2008-09-23 2.3 The structure of the complex between the first domain of L1 protein from Thermus thermophilus and mRNA from Methanococcus jannaschii
2OV7 2007-12-25 2.3 The first domain of the ribosomal protein L1 from Thermus thermophilus
6XZB 2020-11-04 2.54 E. coli 70S ribosome in complex with dirithromycin, fMet-Phe-tRNA(Phe) and deacylated tRNA(iMet) (focused classification).
2OUM 2008-02-26 2.55 The first domain of L1 from Thermus thermophilus
1MMS 2000-04-17 2.57 Crystal structure of the ribosomal PROTEIN L11-RNA complex
6YS3 2020-09-30 2.58 Cryo-EM structure of the 50S ribosomal subunit at 2.58 Angstroms with modeled GBC SecM peptide
1ZHO 2006-05-09 2.6 The structure of a ribosomal protein L1 in complex with mRNA
6YSS 2020-08-19 2.6 Structure of the P+9 ArfB-ribosome complex in the post-hydrolysis state
4QGB 2015-02-11 2.6 Crystal structure of mutant ribosomal protein G219V TthL1
1DIV 1997-01-11 2.6 RIBOSOMAL PROTEIN L9
5J8B 2016-05-25 2.6 Crystal structure of Elongation Factor 4 (EF-4/LepA) in complex with GDPCP bound to the Thermus thermophilus 70S ribosome
6XZA 2020-11-04 2.66 E. coli 70S ribosome in complex with dirithromycin, and deacylated tRNA(iMet) (focused classification).
6TC3 2020-01-01 2.7 Cryo-EM structure of an Escherichia coli ribosome-SpeFL complex stalled in response to L-ornithine (Replicate 1)
5NPM 2018-05-16 2.7 CRYSTAL STRUCTURE OF MUTANT RIBOSOMAL PROTEIN TTHL1 LACKING 8 N-TERMINAL RESIDUES IN COMPLEX WITH 80NT 23S RNA FROM THERMUS THERMOPHILUS
6TBV 2020-01-01 2.7 Cryo-EM structure of an Escherichia coli ribosome-SpeFL complex stalled in response to L-ornithine (Replicate 2)
4V51 2014-07-09 2.8 Structure of the Thermus thermophilus 70S ribosome complexed with mRNA, tRNA and paromomycin
4U26 2014-07-30 2.8 Crystal structure of the E. coli ribosome bound to dalfopristin and quinupristin.
4U27 2014-07-30 2.8 Crystal structure of the E. coli ribosome bound to flopristin and linopristin.
4WQU 2015-01-28 2.8 Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G trapped by the antibiotic dityromycin
4WQF 2015-01-28 2.8 Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G and fusidic acid in the post-translocational state
5J5B 2016-07-27 2.8 Structure of the WT E coli ribosome bound to tetracycline
4WQY 2015-01-28 2.8 Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the post-translocational state (without fusitic acid)
4WPO 2015-01-28 2.8 Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the pre-translocational state
6QDW 2020-01-15 2.83 Cryo-EM structure of the 50S ribosomal subunit at 2.83 Angstroms with modeled GBC SecM peptide
4V9H 2014-07-09 2.86 Crystal structure of the ribosome bound to elongation factor G in the guanosine triphosphatase state
6Y69 2020-07-01 2.86 Cryo-EM structure of an Escherichia coli 70S ribosome in complex with antibiotic TetracenomycinX
5NWY 2017-07-19 2.9 2.9 A cryo-EM structure of VemP-stalled ribosome-nascent chain complex
5AFI 2015-03-11 2.9 2.9A Structure of E. coli ribosome-EF-TU complex by cs-corrected cryo-EM
6I7V 2018-12-05 2.9 Ribosomal protein paralogs bL31 and bL36
4V9O 2014-07-09 2.9 Control of ribosomal subunit rotation by elongation factor G
4U24 2014-07-30 2.9 Crystal structure of the E. coli ribosome bound to dalfopristin.
4V9P 2014-07-09 2.9 Control of ribosomal subunit rotation by elongation factor G
4U20 2014-07-30 2.9 Crystal structure of the E. coli ribosome bound to flopristin.
6ORE 2019-06-19 2.9 Release complex 70S
4U25 2014-07-30 2.9 Crystal structure of the E. coli ribosome bound to virginiamycin M1.
4V90 2014-07-09 2.95 Thermus thermophilus Ribosome
4U1U 2014-07-30 2.95 Crystal structure of the E. coli ribosome bound to quinupristin.
5E81 2016-01-27 2.95 Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with wobble pair
6HRM 2018-12-19 2.96 E. coli 70S d2d8 stapled ribosome
5IBB 2016-05-25 2.96 Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and cognate tRNAVal in the A-site
5J91 2016-07-06 2.96 Structure of the Wild-type 70S E coli ribosome bound to Tigecycline
5MDV 2016-12-14 2.97 Structure of ArfA and RF2 bound to the 70S ribosome (accommodated state)
5IB7 2016-05-25 2.99 Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet, near-cognate tRNALys with U-G mismatch in the A-site and antibiotic paromomycin
4V78 2014-07-09 20.0 E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post3a)
4V71 2014-07-09 20.0 E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate pre-translocation state (pre2)
6ZTO 2020-09-23 3.0 E. coli 70S-RNAP expressome complex in uncoupled state 1
4V9D 2014-07-09 3.0 Structures of the bacterial ribosome in classical and hybrid states of tRNA binding
5HAU 2016-04-06 3.0 Crystal structure of antimicrobial peptide Bac7(1-19) bound to the Thermus thermophilus 70S ribosome
4WOI 2015-08-05 3.0 4,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2
6WDE 2020-07-01 3.0 Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure V-B)
4U1V 2014-07-30 3.0 Crystal structure of the E. coli ribosome bound to linopristin.
6H4N 2018-09-05 3.0 Structure of a hibernating 100S ribosome reveals an inactive conformation of the ribosomal protein S1 - 70S Hibernating E. coli Ribosome
5J7L 2016-07-27 3.0 Structure of the 70S E coli ribosome with the U1052G mutation in the 16S rRNA bound to tetracycline
6ZU1 2020-09-16 3.0 E. coli 70S-RNAP expressome complex in uncoupled state 2
6ZTP 2020-09-16 3.0 E. coli 70S-RNAP expressome complex in uncoupled state 6
5WFS 2018-05-02 3.0 70S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C4)
4V7L 2014-07-09 3.0 The structures of viomycin bound to the 70S ribosome.
5IQR 2016-05-04 3.0 Structure of RelA bound to the 70S ribosome
5WDT 2018-04-25 3.0 70S ribosome-EF-Tu H84A complex with GppNHp
6QUL 2019-04-10 3.0 Structure of a bacterial 50S ribosomal subunit in complex with the novel quinoxolidinone antibiotic cadazolid
5H5U 2017-01-25 3.01 Mechanistic insights into the alternative translation termination by ArfA and RF2
5JC9 2016-07-06 3.03 Structure of the Escherichia coli ribosome with the U1052G mutation in the 16S rRNA
6SZS 2019-12-04 3.06 Release factor-dependent ribosome rescue by BrfA in the Gram-positive bacterium Bacillus subtilis
5MDW 2016-12-14 3.06 Structure of ArfA(A18T) and RF2 bound to the 70S ribosome (pre-accommodated state)
4WF1 2014-11-05 3.09 Crystal structure of the E. coli ribosome bound to negamycin.
6WNT 2020-06-24 3.1 50S ribosomal subunit without free 5S rRNA and perturbed PTC
4V5L 2014-07-09 3.1 The structure of EF-Tu and aminoacyl-tRNA bound to the 70S ribosome with a GTP analog
4V5P 2014-07-09 3.1 The crystal structure of EF-Tu and A9C-tRNA-Trp bound to a near- cognate codon on the 70S ribosome
5MDZ 2016-12-14 3.1 Structure of the 70S ribosome (empty A site)
4V5R 2014-07-09 3.1 The crystal structure of EF-Tu and Trp-tRNA-Trp bound to a cognate codon on the 70S ribosome.
4V5J 2014-07-09 3.1 Structure of the 70S ribosome bound to Release factor 2 and a substrate analog provides insights into catalysis of peptide release
6YSR 2020-08-19 3.1 Structure of the P+9 stalled ribosome complex
6VWL 2020-06-03 3.1 70S ribosome bound to HIV frameshifting stem-loop (FSS) and P/E tRNA (rotated conformation)
4V7U 2014-07-09 3.1 Crystal structure of the E. coli ribosome bound to erythromycin.
4V5Q 2014-07-09 3.1 The crystal structure of EF-Tu and G24A-tRNA-Trp bound to a near- cognate codon on the 70S ribosome
5J8A 2016-07-06 3.1 Structure of the E coli 70S ribosome with the U1052G mutation in 16S rRNA bound to tigecycline
6QNR 2019-06-19 3.1 70S ribosome elongation complex (EC) with experimentally assigned potassium ions
4V6A 2014-07-09 3.1 Structure of EF-P bound to the 70S ribosome.
5MGP 2016-12-14 3.1 Structural basis for ArfA-RF2 mediated translation termination on stop-codon lacking mRNAs
5WE4 2018-04-25 3.1 70S ribosome-EF-Tu wt complex with GppNHp
5EL6 2016-01-27 3.1 Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the first position and antibiotic paromomycin
6ENU 2017-11-22 3.1 Polyproline-stalled ribosome in the presence of elongation-factor P (EF-P)
4V5S 2014-07-09 3.1 The crystal structure of EF-Tu and G24A-tRNA-Trp bound to a cognate codon on the 70S ribosome.
4V8N 2014-07-09 3.1 The crystal structure of agmatidine tRNA-Ile2 bound to the 70S ribosome in the A and P site.
6S0K 2019-10-09 3.1 Ribosome nascent chain in complex with SecA
4WZD 2015-06-10 3.1 Complex of 70S ribosome with cognate tRNA-Tyr in the P-site
4WWW 2014-12-24 3.1 Crystal structure of the E. coli ribosome bound to CEM-101
4V8Q 2014-07-09 3.1 Complex of SmpB, a tmRNA fragment and EF-Tu-GDP-Kirromycin with the 70S ribosome
5IT8 2016-07-27 3.12 High-resolution structure of the Escherichia coli ribosome
5IB8 2016-05-25 3.13 Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and near-cognate tRNALys with U-G mismatch in the A-site
7BV8 2020-07-01 3.14 Mature 50S ribosomal subunit from RrmJ knock out E.coli strain
5EL4 2016-01-27 3.15 Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the first position
5EL5 2016-01-27 3.15 Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the second position
5EL7 2016-01-27 3.15 Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the second position and antibiotic paromomycin
6GSL 2018-07-04 3.16 Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and cognate tRNAArg in the A-site
4V6C 2014-07-09 3.19 Crystal structure of the E. coli 70S ribosome in an intermediate state of ratcheting
4V7T 2014-07-09 3.19 Crystal structure of the E. coli ribosome bound to chloramphenicol.
4WU1 2015-06-10 3.2 Complex of 70S ribosome with tRNA-Tyr and mRNA with G-U mismatch in the second position in the P-site
6WDD 2020-07-01 3.2 Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure V-A)
5UYM 2017-06-07 3.2 70S ribosome bound with cognate ternary complex base-paired to A site codon, closed 30S (Structure III)
5U9F 2017-03-22 3.2 3.2 A cryo-EM ArfA-RF2 ribosome rescue complex (Structure II)
5E7K 2016-01-27 3.2 Structure of T. thermophilus 70S ribosome complex with mRNA and cognate tRNALys in the A-site
5U9G 2017-03-22 3.2 3.2 A cryo-EM ArfA-RF2 ribosome rescue complex (Structure I)
5UQ8 2018-03-07 3.2 70S ribosome complex with dnaX mRNA stem-loop and E-site tRNA ('out' conformation)
6WNW 2020-06-24 3.2 Active 70S ribosome without free 5S rRNA and bound with A- and P- tRNA
6YST 2020-08-19 3.2 Structure of the P+9 ArfB-ribosome complex with P/E hybrid tRNA in the post-hydrolysis state
3JCE 2016-01-13 3.2 Structure of Escherichia coli EF4 in pretranslocational ribosomes (Pre EF4)
6C5L 2018-02-21 3.2 Conformation of methylated GGQ in the Peptidyl Transferase Center during translation termination (T. thermophilus)
6ENF 2017-11-22 3.2 Cryo-EM structure of a polyproline-stalled ribosome in the absence of EF-P
4V5K 2014-07-09 3.2 Structure of cytotoxic domain of colicin E3 bound to the 70S ribosome
4V85 2014-07-09 3.2 Crystal Structure of Release Factor RF3 Trapped in the GTP State on a Rotated Conformation of the Ribosome.
6I0Y 2018-12-05 3.2 TnaC-stalled ribosome complex with the titin I27 domain folding close to the ribosomal exit tunnel
4V52 2014-07-09 3.21 Crystal structure of the bacterial ribosome from Escherichia coli in complex with neomycin.
4V50 2014-07-09 3.22 Crystal Structure of Ribosome with messenger RNA and the Anticodon stem-loop of P-site tRNA.
6C4I 2018-02-21 3.24 Conformation of methylated GGQ in the peptidyl transferase center during translation termination
4V7S 2014-07-09 3.25 Crystal structure of the E. coli ribosome bound to telithromycin.
4V7V 2014-07-09 3.29 Crystal structure of the E. coli ribosome bound to clindamycin.
4V7J 2014-07-09 3.3 Structure of RelE nuclease bound to the 70S ribosome (precleavage state)
4V9C 2014-07-09 3.3 Allosteric control of the ribosome by small-molecule antibiotics
6WDG 2020-07-01 3.3 Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure VI-B)
6ZTM 2020-09-16 3.3 E. coli 70S-RNAP expressome complex in collided state without NusG
4WZO 2015-06-10 3.3 Complex of 70S ribosome with tRNA-fMet and mRNA
4V54 2014-07-09 3.3 Crystal structure of the bacterial ribosome from Escherichia coli in complex with ribosome recycling factor (RRF).
6OFX 2019-09-25 3.3 Non-rotated ribosome (Structure I)
7JT1 2020-11-11 3.3 70S ribosome stalled on long mRNA with ArfB-1 and ArfB-2 bound (+9-III)
6OG7 2019-09-25 3.3 70S termination complex with RF2 bound to the UGA codon. Non-rotated ribosome with RF2 bound (Structure II)
6WDF 2020-07-01 3.3 Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure VI-A)
4V5C 2014-07-09 3.3 Structure of the Thermus thermophilus 70S ribosome in complex with mRNA, paromomycin, acylated A-site tRNA, deacylated P-site tRNA, and E-site tRNA.
3JBV 2016-01-27 3.32 Mechanisms of Ribosome Stalling by SecM at Multiple Elongation Steps
5J88 2016-07-06 3.32 Structure of the E coli 70S ribosome with the U1060A mutation in 16S rRNA
5GAE 2016-01-27 3.33 RNC in complex with a translocating SecYEG
5MDY 2016-12-21 3.35 Structure of ArfA and TtRF2 bound to the 70S ribosome (pre-accommodated state)
4V8X 2014-07-09 3.35 Structure of Thermus thermophilus ribosome
6VWN 2020-06-03 3.4 70S ribosome bound to HIV frameshifting stem-loop (FSS) and P-site tRNA (non-rotated conformation, Structure II)
5O2R 2017-07-26 3.4 Cryo-EM structure of the proline-rich antimicrobial peptide Api137 bound to the terminating ribosome
6ZTJ 2020-09-16 3.4 E. coli 70S-RNAP expressome complex in NusG-coupled state (38 nt intervening mRNA)
6VWM 2020-06-03 3.4 70S ribosome bound to HIV frameshifting stem-loop (FSS) and P-site tRNA (non-rotated conformation, Structure I)
5WE6 2018-04-25 3.4 70S ribosome-EF-Tu H84A complex with GTP and cognate tRNA
5WFK 2018-05-02 3.4 70S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C3)
4WT8 2015-01-21 3.4 Crystal Structure of bactobolin A bound to 70S ribosome-tRNA complex
5LZD 2016-11-23 3.4 Structure of SelB-Sec-tRNASec bound to the 70S ribosome in the GTPase activated state (GA)
4V7M 2014-07-09 3.45 The structures of Capreomycin bound to the 70S ribosome.
4V5E 2014-07-09 3.45 Insights into translational termination from the structure of RF2 bound to the ribosome
4V4H 2014-07-09 3.46 Crystal structure of the bacterial ribosome from Escherichia coli in complex with the antibiotic kasugamyin at 3.5A resolution.
4V4Q 2014-07-09 3.46 Crystal structure of the bacterial ribosome from Escherichia coli at 3.5 A resolution.
5U4I 2017-01-11 3.5 Structural Basis of Co-translational Quality Control by ArfA and RF2 Bound to Ribosome
7JT2 2020-11-11 3.5 70S ribosome stalled on long mRNA with ArfB bound in the A site
6QNQ 2019-06-19 3.5 70S ribosome initiation complex (IC) with experimentally assigned potassium ions
4V5A 2014-07-09 3.5 Structure of the Ribosome Recycling Factor bound to the Thermus thermophilus 70S ribosome with mRNA, ASL-Phe and tRNA-fMet
5LZE 2016-11-23 3.5 Structure of the 70S ribosome with Sec-tRNASec in the classical pre-translocation state (C)
6ORL 2019-06-19 3.5 RF1 pre-accommodated 70S complex at 24 ms
6ZTL 2020-09-16 3.5 E. coli 70S-RNAP expressome complex in collided state bound to NusG
4V5D 2014-07-09 3.5 Structure of the Thermus thermophilus 70S ribosome in complex with mRNA, paromomycin, acylated A- and P-site tRNAs, and E-site tRNA.
4V9K 2014-07-09 3.5 70S ribosome translocation intermediate GDPNP-I containing elongation factor EFG/GDPNP, mRNA, and tRNA bound in the pe*/E state.
6WNV 2020-06-24 3.5 70S ribosome without free 5S rRNA and with a perturbed PTC
4V64 2014-07-09 3.5 Crystal structure of the bacterial ribosome from Escherichia coli in complex with hygromycin B.
6BU8 2018-01-31 3.5 70S ribosome with S1 domains 1 and 2 (Class 1)
4V9L 2014-07-09 3.5 70S Ribosome translocation intermediate FA-3.6A containing elongation factor EFG/FUSIDIC ACID/GDP, mRNA, and tRNA bound in the pe*/E state.
4V57 2014-07-09 3.5 Crystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin and neomycin.
5UQ7 2018-03-07 3.5 70S ribosome complex with dnaX mRNA stemloop and E-site tRNA ('in' conformation)
4V97 2014-07-09 3.52 Crystal structure of the bacterial ribosome ram mutation G299A.
4V53 2014-07-09 3.54 Crystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin.
5LZA 2016-11-23 3.6 Structure of the 70S ribosome with SECIS-mRNA and P-site tRNA (Initial complex, IC)
5KCR 2016-08-17 3.6 Cryo-EM structure of the Escherichia coli 70S ribosome in complex with antibiotic Avilamycin C, mRNA and P-site tRNA at 3.6A resolution
3J9Z 2015-07-01 3.6 Activation of GTP Hydrolysis in mRNA-tRNA Translocation by Elongation Factor G
4V5F 2014-07-09 3.6 The structure of the ribosome with elongation factor G trapped in the post-translocational state
4V5G 2014-07-09 3.6 The crystal structure of the 70S ribosome bound to EF-Tu and tRNA
5JU8 2016-07-20 3.6 Cryo-EM structure of an ErmBL-stalled ribosome in complex with P-, and E-tRNA
5JTE 2016-07-20 3.6 Cryo-EM structure of an ErmBL-stalled ribosome in complex with A-, P-, and E-tRNA
5ZLU 2018-08-01 3.6 Ribosome Structure bound to ABC-F protein.
5UYL 2017-06-14 3.6 70S ribosome bound with cognate ternary complex base-paired to A site codon (Structure II)
3JA1 2015-07-01 3.6 Activation of GTP Hydrolysis in mRNA-tRNA Translocation by Elongation Factor G
4V7K 2014-07-09 3.6 Structure of RelE nuclease bound to the 70S ribosome (postcleavage state)
5WF0 2018-05-02 3.6 70S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C2)
5NP6 2017-06-14 3.6 70S structure prior to bypassing
6WDM 2020-07-01 3.6 Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Non-cognate Structure V-B2)
6WDK 2020-07-08 3.6 Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Non-cognate Structure V-A2)
3JBU 2016-01-27 3.64 Mechanisms of Ribosome Stalling by SecM at Multiple Elongation Steps
6Q9A 2019-04-17 3.7 Structure of tmRNA SmpB bound past E site of E. coli 70S ribosome
6Q95 2019-02-27 3.7 Structure of tmRNA SmpB bound in A site of T. thermophilus 70S ribosome
3JCJ 2016-03-09 3.7 Structures of ribosome-bound initiation factor 2 reveal the mechanism of subunit association
7JT3 2020-11-11 3.7 Rotated 70S ribosome stalled on long mRNA with ArfB-1 and ArfB-2 bound in the A site (+9-IV)
6OUO 2019-06-19 3.7 RF2 accommodated state bound 70S complex at long incubation time
6WDJ 2020-07-01 3.7 Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Non-cognate Structure V-A1)
5GAD 2016-01-27 3.7 RNC-SRP-SR complex early state
6DNC 2018-07-04 3.7 E.coli RF1 bound to E.coli 70S ribosome in response to UAU sense A-site codon
5L3P 2016-07-20 3.7 Cryo-EM structure of stringent response factor RelA bound to ErmCL-stalled ribosome complex
6ENJ 2017-11-22 3.7 Polyproline-stalled ribosome in the presence of A+P site tRNA and elongation-factor P (EF-P)
7JSZ 2020-11-11 3.7 ArfB Rescue of a 70S Ribosome stalled on truncated mRNA with a partial A-site codon (+2-IV)
7JSS 2020-11-11 3.7 ArfB Rescue of a 70S Ribosome stalled on truncated mRNA with a partial A-site codon (+2-II)
6WD6 2020-07-08 3.7 Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure II-C2)
4V89 2014-07-09 3.7 Crystal Structure of Release Factor RF3 Trapped in the GTP State on a Rotated Conformation of the Ribosome (without viomycin)
4V8U 2014-07-09 3.7 Crystal Structure of 70S Ribosome with Both Cognate tRNAs in the E and P Sites Representing an Authentic Elongation Complex.
6YSU 2020-08-19 3.7 Structure of the P+0 ArfB-ribosome complex in the post-hydrolysis state
3JCD 2016-01-13 3.7 Structure of Escherichia coli EF4 in posttranslocational ribosomes (Post EF4)
6WDL 2020-07-01 3.7 Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Non-cognate Structure V-B1)
4V6E 2014-07-09 3.71 Crystal structure of the E. coli 70S ribosome in an intermediate state of ratcheting
4V4I 2014-07-09 3.71 Crystal Structure of a 70S Ribosome-tRNA Complex Reveals Functional Interactions and Rearrangements.
4V5B 2014-07-09 3.74 Structure of PDF binding helix in complex with the ribosome
5UYQ 2017-06-07 3.8 70S ribosome bound with near-cognate ternary complex base-paired to A site codon, closed 30S (Structure III-nc)
5GAH 2016-01-27 3.8 RNC in complex with SRP with detached NG domain
6GC0 2018-06-20 3.8 50S ribosomal subunit assembly intermediate state 4
6GXM 2018-08-22 3.8 Cryo-EM structure of an E. coli 70S ribosome in complex with RF3-GDPCP, RF1(GAQ) and Pint-tRNA (State II)
7JSW 2020-11-11 3.8 ArfB Rescue of a 70S Ribosome stalled on truncated mRNA with a partial A-site codon (+2-III)
5GAG 2016-01-27 3.8 RNC in complex with SRP-SR in the closed state
6GC8 2018-06-20 3.8 50S ribosomal subunit assembly intermediate - 50S rec*
5IMQ 2016-05-18 3.8 Structure of ribosome bound to cofactor at 3.8 angstrom resolution
6GBZ 2018-06-20 3.8 50S ribosomal subunit assembly intermediate state 5
5OT7 2018-02-14 3.8 Elongation factor G-ribosome complex captures in the absence of inhibitors.
6GWT 2018-08-15 3.8 Cryo-EM structure of an E. coli 70S ribosome in complex with RF3-GDPCP, RF1(GAQ) and Pint-tRNA (State I)
4UY8 2014-10-29 3.8 Molecular basis for the ribosome functioning as a L-tryptophan sensor - Cryo-EM structure of a TnaC stalled E.coli ribosome
4V8O 2014-07-09 3.8 Crystal structure of the hybrid state of ribosome in complex with the guanosine triphosphatase release factor 3
4V6D 2014-07-09 3.81 Crystal structure of the E. coli 70S ribosome in an intermediate state of ratcheting
4V4J 2014-07-09 3.83 Interactions and Dynamics of the Shine-Dalgarno Helix in the 70S Ribosome.
4V9J 2014-07-09 3.86 70S ribosome translocation intermediate GDPNP-II containing elongation factor EFG/GDPNP, mRNA, and tRNA bound in the pe*/E state.
5KPW 2016-09-28 3.9 Structure of RelA bound to ribosome in presence of A/R tRNA (Structure III)
6Q97 2019-03-13 3.9 Structure of tmRNA SmpB bound in A site of E. coli 70S ribosome
4V8J 2014-07-09 3.9 Crystal structure of the bacterial ribosome ram mutation G347U.
5KCS 2016-08-17 3.9 Cryo-EM structure of the Escherichia coli 70S ribosome in complex with antibiotic Evernimycin, mRNA, TetM and P-site tRNA at 3.9A resolution
6GXO 2018-08-15 3.9 Cryo-EM structure of a rotated E. coli 70S ribosome in complex with RF3-GDPCP, RF1(GAQ) and P/E-tRNA (State IV)
3J7Z 2014-10-22 3.9 Structure of the E. coli 50S subunit with ErmCL nascent chain
5KPS 2016-09-28 3.9 Structure of RelA bound to ribosome in absence of A/R tRNA (Structure I)
6O9J 2019-05-29 3.9 70S Elongation Competent Ribosome
5KPX 2016-09-28 3.9 Structure of RelA bound to ribosome in presence of A/R tRNA (Structure IV)
5UYK 2017-06-07 3.9 70S ribosome bound with cognate ternary complex not base-paired to A site codon (Structure I)
6ZTN 2020-09-16 3.9 E. coli 70S-RNAP expressome complex in NusG-coupled state (42 nt intervening mRNA)
6OT3 2019-06-19 3.9 RF2 accommodated state bound Release complex 70S at 24 ms
3J9Y 2015-04-15 3.9 Cryo-EM structure of tetracycline resistance protein TetM bound to a translating E.coli ribosome
5UYP 2017-06-07 3.9 70S ribosome bound with near-cognate ternary complex base-paired to A site codon, open 30S (Structure II-nc)
6GXN 2018-08-15 3.9 Cryo-EM structure of an E. coli 70S ribosome in complex with RF3-GDPCP, RF1(GAQ) and Pint-tRNA (State III)
4V56 2014-07-09 3.93 Crystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin.
6BY1 2019-02-27 3.94 E. coli pH03H9 complex
6WDI 2020-07-01 4.0 Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Non-cognate Structure IV-B2)
5UYN 2017-06-07 4.0 70S ribosome bound with near-cognate ternary complex not base-paired to A site codon (Structure I-nc)
4V9M 2014-07-09 4.0 70S Ribosome translocation intermediate FA-4.2A containing elongation factor EFG/FUSIDIC ACID/GDP, mRNA, and tRNA bound in the pe*/E state.
6O9K 2019-05-29 4.0 70S initiation complex
6WDB 2020-07-01 4.0 Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure IV-A)
4V55 2014-07-09 4.0 Crystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin and ribosome recycling factor (RRF).
5KPV 2016-09-28 4.1 Structure of RelA bound to ribosome in presence of A/R tRNA (Structure II)
6OST 2019-06-19 4.2 RF2 pre-accommodated state bound Release complex 70S at 24ms
6WDC 2020-07-01 4.2 Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure IV-B)
6GC4 2018-07-04 4.3 50S ribosomal subunit assembly intermediate state 3
5GAF 2016-02-03 4.3 RNC in complex with SRP
6Q98 2019-02-27 4.3 Structure of tmRNA SmpB bound in P site of E. coli 70S ribosome
6WDH 2020-07-01 4.3 Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Non-cognate Structure IV-B1)
6GXP 2018-08-15 4.4 Cryo-EM structure of a rotated E. coli 70S ribosome in complex with RF3-GDPCP(RF3-only)
4V5Y 2014-07-09 4.45 Crystal structure of the bacterial ribosome from Escherichia coli in complex with paromomycin and ribosome recycling factor (RRF).
5ADY 2015-10-14 4.5 Cryo-EM structures of the 50S ribosome subunit bound with HflX
4V4Z 2014-07-09 4.51 70S Thermus thermophilous ribosome functional complex with mRNA and E- and P-site tRNAs at 4.5A.
5LZF 2016-11-23 4.6 Structure of the 70S ribosome with fMetSec-tRNASec in the hybrid pre-translocation state (H)
3JCN 2016-03-09 4.6 Structures of ribosome-bound initiation factor 2 reveal the mechanism of subunit association: Initiation Complex I
5A9Z 2015-10-14 4.7 Complex of Thermous thermophilus ribosome bound to BipA-GDPCP
5NCO 2017-05-24 4.8 Quaternary complex between SRP, SR, and SecYEG bound to the translating ribosome
5LZC 2016-11-23 4.8 Structure of SelB-Sec-tRNASec bound to the 70S ribosome in the codon reading state (CR)
4V4X 2014-07-09 5.0 Crystal structure of the 70S Thermus thermophilus ribosome showing how the 16S 3'-end mimicks mRNA E and P codons.
3J8G 2014-11-26 5.0 Electron cryo-microscopy structure of EngA bound with the 50S ribosomal subunit
1C04 1999-08-31 5.0 IDENTIFICATION OF KNOWN PROTEIN AND RNA STRUCTURES IN A 5 A MAP OF THE LARGE RIBOSOMAL SUBUNIT FROM HALOARCULA MARISMORTUI
5AA0 2015-10-14 5.0 Complex of Thermous thermophilus ribosome (A-and P-site tRNA) bound to BipA-GDPCP
5LZB 2016-11-23 5.3 Structure of SelB-Sec-tRNASec bound to the 70S ribosome in the initial binding state (IB)
4CSU 2014-06-04 5.5 Cryo-EM structures of the 50S ribosome subunit bound with ObgE
4V4Y 2014-07-09 5.5 Crystal structure of the 70S Thermus thermophilus ribosome with translocated and rotated Shine-Dalgarno Duplex.
4V42 2014-07-09 5.5 Crystal structure of the ribosome at 5.5 A resolution.
4V4P 2014-07-09 5.5 Crystal structure of 70S ribosome with thrS operator and tRNAs.
5AKA 2015-03-25 5.7 EM structure of ribosome-SRP-FtsY complex in closed state
5IMR 2016-05-18 5.7 Structure of ribosome bound to cofactor at 5.7 angstrom resolution
4V5H 2014-07-09 5.8 E.Coli 70s Ribosome Stalled During Translation Of Tnac Leader Peptide.
4V4R 2014-07-09 5.9 Crystal structure of the whole ribosomal complex.
4V68 2014-07-09 6.4 T. thermophilus 70S ribosome in complex with mRNA, tRNAs and EF-Tu.GDP.kirromycin ternary complex, fitted to a 6.4 A Cryo-EM map.
4V4T 2014-07-09 6.46 Crystal structure of the whole ribosomal complex with a stop codon in the A-site.
3J5L 2014-03-26 6.6 Structure of the E. coli 50S subunit with ErmBL nascent chain
4V69 2014-07-09 6.7 Ternary complex-bound E.coli 70S ribosome.
4V4S 2014-07-09 6.76 Crystal structure of the whole ribosomal complex.
4V7B 2014-07-09 6.8 Visualization of two tRNAs trapped in transit during EF-G-mediated translocation
4V6M 2014-07-09 7.1 Structure of the ribosome-SecYE complex in the membrane environment
2OM7 2008-01-15 7.3 Structural Basis for Interaction of the Ribosome with the Switch Regions of GTP-bound Elongation Factors
487D 2000-04-10 7.5 SEVEN RIBOSOMAL PROTEINS FITTED TO A CRYO-ELECTRON MICROSCOPIC MAP OF THE LARGE 50S SUBUNIT AT 7.5 ANGSTROMS RESOLUTION
4V7C 2014-07-09 7.6 Structure of the Ribosome with Elongation Factor G Trapped in the Pre-Translocation State (pre-translocation 70S*tRNA structure)
4V5N 2014-07-09 7.6 tRNA translocation on the 70S ribosome: the post- translocational translocation intermediate TI(POST)
4V7D 2014-07-09 7.6 Structure of the Ribosome with Elongation Factor G Trapped in the Pre-Translocation State (pre-translocation 70S*tRNA*EF-G structure)
4V5M 2014-07-09 7.8 tRNA tranlocation on the 70S ribosome: the pre-translocational translocation intermediate TI(PRE)
6H58 2018-09-05 7.9 Structure of a hibernating 100S ribosome reveals an inactive conformation of the ribosomal protein S1 - Full 100S Hibernating E. coli Ribosome
4V6K 2014-07-09 8.25 Structural insights into cognate vs. near-cognate discrimination during decoding.
4V6T 2014-07-09 8.3 Structure of the bacterial ribosome complexed by tmRNA-SmpB and EF-G during translocation and MLD-loading
4V7A 2014-07-09 9.0 E. coli 70S-fMetVal-tRNAVal post-translocation complex (post4)
1R2W 2003-11-04 9.0 Coordinates of L11 with 58nts of 23S rRNA fitted into the cryo-EM map of the 70S ribosome
1R2X 2003-11-04 9.0 Coordinates of L11 with 58nts of 23S rRNA fitted into the cryo-EM map of EF-Tu ternary complex (GDP.Kirromycin) bound 70S ribosome
4V65 2014-07-09 9.0 Structure of the E. coli ribosome in the Pre-accommodation state
4V66 2014-07-09 9.0 Structure of the E. coli ribosome and the tRNAs in Post-accommodation state
2RDO 2008-03-04 9.1 50S subunit with EF-G(GDPNP) and RRF bound
2J28 2006-11-08 9.5 MODEL OF E. COLI SRP BOUND TO 70S RNCS
4V7I 2014-07-09 9.6 Ribosome-SecY complex.
4V6V 2014-07-09 9.8 Tetracycline resistance protein Tet(O) bound to the ribosome

Relevant UniProtKB Entries

Percent Identity Matching Chains Protein Accession Entry Name
90.6 50S ribosomal protein L9 A1JIT1 RL9_YERE8
91.9 50S ribosomal protein L9 B5Y305 RL9_KLEP3
91.9 50S ribosomal protein L9 B2VCV8 RL9_ERWT9
93.3 50S ribosomal protein L9 A6THB4 RL9_KLEP7
94.0 50S ribosomal protein L9 A7MM80 RL9_CROS8
93.3 50S ribosomal protein L9 A4W5T2 RL9_ENT38
95.3 50S ribosomal protein L9 Q8ZK80 RL9_SALTY
95.3 50S ribosomal protein L9 A9N521 RL9_SALPB
95.3 50S ribosomal protein L9 B4T3F4 RL9_SALNS
95.3 50S ribosomal protein L9 B4TFD8 RL9_SALHS
95.3 50S ribosomal protein L9 B5R9F1 RL9_SALG2
95.3 50S ribosomal protein L9 B5R0S1 RL9_SALEP
95.3 50S ribosomal protein L9 B5FSA4 RL9_SALDC
96.6 50S ribosomal protein L9 A8AMJ4 RL9_CITK8
96.0 50S ribosomal protein L9 Q8Z163 RL9_SALTI
96.0 50S ribosomal protein L9 B4TT36 RL9_SALSV
96.0 50S ribosomal protein L9 B5BKL2 RL9_SALPK
96.0 50S ribosomal protein L9 C0Q6G1 RL9_SALPC
96.0 50S ribosomal protein L9 Q5PJ55 RL9_SALPA
96.0 50S ribosomal protein L9 Q57GI8 RL9_SALCH
96.0 50S ribosomal protein L9 A9MF07 RL9_SALAR
96.0 50S ribosomal protein L9 B5F3C0 RL9_SALA4
99.3 50S ribosomal protein L9 Q328J6 RL9_SHIDS
100.0 50S ribosomal protein L9 Q3YUE4 RL9_SHISS
100.0 50S ribosomal protein L9 P0A7R4 RL9_SHIFL
100.0 50S ribosomal protein L9 Q0SX83 RL9_SHIF8
100.0 50S ribosomal protein L9 Q31TD4 RL9_SHIBS
100.0 50S ribosomal protein L9 B2TY76 RL9_SHIB3
100.0 50S ribosomal protein L9 B7LLY5 RL9_ESCF3
100.0 50S ribosomal protein L9 Q1R357 RL9_ECOUT
100.0 50S ribosomal protein L9 B1LR79 RL9_ECOSM
100.0 50S ribosomal protein L9 B6I2A9 RL9_ECOSE
100.0 50S ribosomal protein L9 B7NGD7 RL9_ECOLU
100.0 50S ribosomal protein L9 P0A7R1 RL9_ECOLI
100.0 50S ribosomal protein L9 B1IT03 RL9_ECOLC
100.0 50S ribosomal protein L9 P0A7R2 RL9_ECOL6
100.0 50S ribosomal protein L9 Q0T9J0 RL9_ECOL5
100.0 50S ribosomal protein L9 A1AJA7 RL9_ECOK1
100.0 50S ribosomal protein L9 A8A7U9 RL9_ECOHS
100.0 50S ribosomal protein L9 B1XDV3 RL9_ECODH
100.0 50S ribosomal protein L9 C4ZR80 RL9_ECOBW
100.0 50S ribosomal protein L9 B7M9G5 RL9_ECO8A
100.0 50S ribosomal protein L9 B7MT77 RL9_ECO81
100.0 50S ribosomal protein L9 B7NTQ8 RL9_ECO7I
100.0 50S ribosomal protein L9 B5Z2K8 RL9_ECO5E
100.0 50S ribosomal protein L9 P0A7R3 RL9_ECO57
100.0 50S ribosomal protein L9 B7LCR4 RL9_ECO55
100.0 50S ribosomal protein L9 B7MLK8 RL9_ECO45
100.0 50S ribosomal protein L9 B7UQL2 RL9_ECO27
100.0 50S ribosomal protein L9 A7ZV74 RL9_ECO24
95.3 50S ribosomal protein L9 Q5KU74 RL9_GEOKA
96.6 50S ribosomal protein L9 A4ITV1 RL9_GEOTN
100.0 50S ribosomal protein L9 P02417 RL9_GEOSE
90.4 N 50S ribosomal protein L1 B5RC63 RL25_SALG2
91.5 N 50S ribosomal protein L1 A8AE31 RL25_CITK8
90.4 N 50S ribosomal protein L1 A9MK27 RL25_SALAR
91.5 N 50S ribosomal protein L1 Q7CQ71 RL25_SALTY
91.5 N 50S ribosomal protein L1 Q8XFE7 RL25_SALTI
91.5 N 50S ribosomal protein L1 B4TPC7 RL25_SALSV
91.5 N 50S ribosomal protein L1 B5BE12 RL25_SALPK
91.5 N 50S ribosomal protein L1 C0Q0R6 RL25_SALPC
91.5 N 50S ribosomal protein L1 A9N6F6 RL25_SALPB
91.5 N 50S ribosomal protein L1 Q5PE20 RL25_SALPA
91.5 N 50S ribosomal protein L1 B4SYR0 RL25_SALNS
91.5 N 50S ribosomal protein L1 B4TAP8 RL25_SALHS
91.5 N 50S ribosomal protein L1 B5R194 RL25_SALEP
91.5 N 50S ribosomal protein L1 B5FNN0 RL25_SALDC
91.5 N 50S ribosomal protein L1 Q57MB4 RL25_SALCH
91.5 N 50S ribosomal protein L1 B5EYS6 RL25_SALA4
92.6 N 50S ribosomal protein L1 B7LJS7 RL25_ESCF3
96.8 N 50S ribosomal protein L1 B1LKT4 RL25_ECOSM
96.8 N 50S ribosomal protein L1 B7N5E9 RL25_ECOLU
96.8 N 50S ribosomal protein L1 Q8FFS1 RL25_ECOL6
96.8 N 50S ribosomal protein L1 Q0TFQ4 RL25_ECOL5
96.8 N 50S ribosomal protein L1 B7MXK1 RL25_ECO81
96.8 N 50S ribosomal protein L1 B7NN00 RL25_ECO7I
96.8 N 50S ribosomal protein L1 B7MFA0 RL25_ECO45
96.8 N 50S ribosomal protein L1 B7UFK2 RL25_ECO27
98.9 N 50S ribosomal protein L1 Q31YZ2 RL25_SHIBS
98.9 N 50S ribosomal protein L1 B2TV63 RL25_SHIB3
98.9 N 50S ribosomal protein L1 B5YWX8 RL25_ECO5E
98.9 N 50S ribosomal protein L1 Q8XE69 RL25_ECO57
100.0 N 50S ribosomal protein L1 Q3Z022 RL25_SHISS
100.0 N 50S ribosomal protein L1 P68918 RL25_SHIFL
100.0 N 50S ribosomal protein L1 Q32HY5 RL25_SHIDS
100.0 N 50S ribosomal protein L1 B6I184 RL25_ECOSE
100.0 N 50S ribosomal protein L1 P68919 RL25_ECOLI
100.0 N 50S ribosomal protein L1 B1IY84 RL25_ECOLC
100.0 N 50S ribosomal protein L1 A8A248 RL25_ECOHS
100.0 N 50S ribosomal protein L1 B1X883 RL25_ECODH
100.0 N 50S ribosomal protein L1 C4ZU30 RL25_ECOBW
100.0 N 50S ribosomal protein L1 B7M535 RL25_ECO8A
100.0 N 50S ribosomal protein L1 B7LAK9 RL25_ECO55
100.0 N 50S ribosomal protein L1 A7ZP09 RL25_ECO24
96.2 L 50S ribosomal protein L1 B9KBJ9 RL11_THENN
97.7 L 50S ribosomal protein L1 A5IJW7 RL11_THEP1
100.0 L 50S ribosomal protein L1 B1L939 RL11_THESQ
100.0 L 50S ribosomal protein L1 P29395 RL11_THEMA
95.1 M 50S ribosomal protein L1 B7GJ77 RL14_ANOFW
98.4 M 50S ribosomal protein L1 C5D3S7 RL14_GEOSW
99.2 M 50S ribosomal protein L1 A4IJJ9 RL14_GEOTN
100.0 M 50S ribosomal protein L1 P04450 RL14_GEOSE
100.0 M 50S ribosomal protein L1 Q5L413 RL14_GEOKA
99.4 J 50S ribosomal protein L1 P02391 RL6_GEOSE
99.4 J 50S ribosomal protein L1 Q5L408 RL6_GEOKA
98.7 H 50S ribosomal protein L1 Q5SLP7 RL1_THET8
99.6 H 50S ribosomal protein L1 P27150 RL1_THETH
99.6 H 50S ribosomal protein L1 Q72GV9 RL1_THET2
97.0 I 50S ribosomal protein L1 C5D3S0 RL2_GEOSW
97.0 I 50S ribosomal protein L1 A4IJJ2 RL2_GEOTN
100.0 I 50S ribosomal protein L1 P04257 RL2_GEOSE
100.0 I 50S ribosomal protein L1 Q5L3Z4 RL2_GEOKA