The F(1)F(0) ATP synthase is a reversible molecular motor that employs a rotary catalytic cycle to couple a chemiosmotic membrane potential to the formation/hydrolysis of ATP. The multisubunit enzyme contains two copies of the b subunit that form a homodimer as part of a narrow, peripheral stalk structure that connects the membrane (F(0)) and soluble (F(1)) sectors. The three-dimensional structure of the b subunit is unknown making the nature of any interactions or conformational changes within the F(1)F(0) complex difficult to interpret. We have used circular dichroism and analytical ultracentrifugation analyses of a series of N- and C-terminal truncated b proteins to investigate its stability and structure. Thermal denaturation of the b constructs exhibited distinct two-state, cooperative unfolding with T(m) values between 30 and 40 degrees C. CD spectra for the region comprising residues 53-122 (b(53-122)) showed theta;(222)/theta;(208) = 0.99, which reduced to 0.92 in the presence of the hydrophobic solvent trifluoroethanol. Thermodynamic parameters for b(53-122) (DeltaG, DeltaH and DeltaC(p)) were similar to those reported for several nonideal, coiled-coil proteins. Together these results are most consistent with a noncanonical and unstable parallel coiled-coil at the interface of the b dimer. Study holds ProTherm entries: 14865, 14866, 14867, 14868, 14869, 14870, 14871, 14872, 14873, 14874 Extra Details: Residue b24-156. The entire soluble region of the b subunit lacking only the leading 23 residues proposed to span the membrane. protein domains; coiled-coil: thermal denaturation; circular dichroism;,ultracentrifugation
ID: FH7ZeeKo
Submitter: Connie Wang
Submission Date: April 24, 2018, 8:45 p.m.
Version: 1
Colors: | D | E | R | H | K | S | T | N | Q | A | V | I | L | M | F | Y | W | C | G | P |
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Percent Identity | Matching Chains | Protein | Accession | Entry Name |
---|---|---|---|---|
100.0 | ATP synthase subunit a | A7ZTV0 | ATP6_ECO24 | |
100.0 | ATP synthase subunit a | B7L888 | ATP6_ECO55 | |
100.0 | ATP synthase subunit a | P0AB99 | ATP6_ECO57 | |
100.0 | ATP synthase subunit a | B5YXE2 | ATP6_ECO5E | |
100.0 | ATP synthase subunit a | B7M594 | ATP6_ECO8A | |
100.0 | ATP synthase subunit a | C4ZZ16 | ATP6_ECOBW | |
100.0 | ATP synthase subunit a | B1X9W6 | ATP6_ECODH | |
100.0 | ATP synthase subunit a | A8A6K1 | ATP6_ECOHS | |
100.0 | ATP synthase subunit a | B1IX00 | ATP6_ECOLC | |
100.0 | ATP synthase subunit a | P0AB98 | ATP6_ECOLI | |
100.0 | ATP synthase subunit a | B6I3X5 | ATP6_ECOSE | |
100.0 | ATP synthase subunit a | B2TUN7 | ATP6_SHIB3 | |
100.0 | ATP synthase subunit a | Q3YVP2 | ATP6_SHISS | |
99.6 | ATP synthase subunit a | Q0SYT8 | ATP6_SHIF8 | |
99.6 | ATP synthase subunit a | Q83PJ8 | ATP6_SHIFL | |
100.0 | M | ATP synthase subunit c | B7UMK3 | ATP6_ECO27 |
100.0 | M | ATP synthase subunit c | B7MGF8 | ATP6_ECO45 |
100.0 | M | ATP synthase subunit c | B7NR40 | ATP6_ECO7I |
100.0 | M | ATP synthase subunit c | B7N241 | ATP6_ECO81 |
100.0 | M | ATP synthase subunit c | A1AHR8 | ATP6_ECOK1 |
100.0 | M | ATP synthase subunit c | Q0TAX1 | ATP6_ECOL5 |
100.0 | M | ATP synthase subunit c | Q8FBS8 | ATP6_ECOL6 |
100.0 | M | ATP synthase subunit c | B7NF54 | ATP6_ECOLU |
100.0 | M | ATP synthase subunit c | B1LL65 | ATP6_ECOSM |
100.0 | M | ATP synthase subunit c | Q1R4J4 | ATP6_ECOUT |
100.0 | M | ATP synthase subunit c | B7LK83 | ATP6_ESCF3 |
100.0 | M | ATP synthase subunit c | Q329S7 | ATP6_SHIDS |
97.7 | M | ATP synthase subunit c | B5EZ02 | ATP6_SALA4 |
97.7 | M | ATP synthase subunit c | Q57HX3 | ATP6_SALCH |
97.7 | M | ATP synthase subunit c | B5FN39 | ATP6_SALDC |
97.7 | M | ATP synthase subunit c | B5QVD8 | ATP6_SALEP |
97.7 | M | ATP synthase subunit c | B5RFV7 | ATP6_SALG2 |
97.7 | M | ATP synthase subunit c | B4TAX8 | ATP6_SALHS |
97.7 | M | ATP synthase subunit c | B4SYD7 | ATP6_SALNS |
97.7 | M | ATP synthase subunit c | Q5PKW6 | ATP6_SALPA |
97.7 | M | ATP synthase subunit c | A9MXB2 | ATP6_SALPB |
97.7 | M | ATP synthase subunit c | C0Q2N8 | ATP6_SALPC |
97.7 | M | ATP synthase subunit c | B5BIP2 | ATP6_SALPK |
97.7 | M | ATP synthase subunit c | B4TN37 | ATP6_SALSV |
97.7 | M | ATP synthase subunit c | Q8XGC2 | ATP6_SALTI |
97.7 | M | ATP synthase subunit c | Q7CPE3 | ATP6_SALTY |
97.2 | M | ATP synthase subunit c | A8ACP4 | ATP6_CITK8 |
97.7 | M | ATP synthase subunit c | A9MJR3 | ATP6_SALAR |
96.0 | M | ATP synthase subunit c | A4WGE9 | ATP6_ENT38 |
93.8 | M | ATP synthase subunit c | B5XZL8 | ATP6_KLEP3 |
95.5 | M | ATP synthase subunit c | A7MMW0 | ATP6_CROS8 |
93.8 | M | ATP synthase subunit c | A6TG42 | ATP6_KLEP7 |
1200.0 | A,B,C,D,E,F,G,H,I,J,K,L | ATP synthase subunit c | A8ACP3 | ATPL_CITK8 |
1200.0 | A,B,C,D,E,F,G,H,I,J,K,L | ATP synthase subunit c | A7MMV9 | ATPL_CROS8 |
1200.0 | A,B,C,D,E,F,G,H,I,J,K,L | ATP synthase subunit c | A7ZTU9 | ATPL_ECO24 |
1200.0 | A,B,C,D,E,F,G,H,I,J,K,L | ATP synthase subunit c | B7UMK2 | ATPL_ECO27 |
1200.0 | A,B,C,D,E,F,G,H,I,J,K,L | ATP synthase subunit c | B7MGF7 | ATPL_ECO45 |
1200.0 | A,B,C,D,E,F,G,H,I,J,K,L | ATP synthase subunit c | B7L883 | ATPL_ECO55 |
1200.0 | A,B,C,D,E,F,G,H,I,J,K,L | ATP synthase subunit c | P68701 | ATPL_ECO57 |
1200.0 | A,B,C,D,E,F,G,H,I,J,K,L | ATP synthase subunit c | B5YXE1 | ATPL_ECO5E |
1200.0 | A,B,C,D,E,F,G,H,I,J,K,L | ATP synthase subunit c | B7NR39 | ATPL_ECO7I |
1200.0 | A,B,C,D,E,F,G,H,I,J,K,L | ATP synthase subunit c | B7N2H6 | ATPL_ECO81 |
1200.0 | A,B,C,D,E,F,G,H,I,J,K,L | ATP synthase subunit c | B7M593 | ATPL_ECO8A |
1200.0 | A,B,C,D,E,F,G,H,I,J,K,L | ATP synthase subunit c | C4ZZ15 | ATPL_ECOBW |
1200.0 | A,B,C,D,E,F,G,H,I,J,K,L | ATP synthase subunit c | B1X9W5 | ATPL_ECODH |
1200.0 | A,B,C,D,E,F,G,H,I,J,K,L | ATP synthase subunit c | A8A6K0 | ATPL_ECOHS |
1200.0 | A,B,C,D,E,F,G,H,I,J,K,L | ATP synthase subunit c | Q0TAX2 | ATPL_ECOL5 |
1200.0 | A,B,C,D,E,F,G,H,I,J,K,L | ATP synthase subunit c | P68700 | ATPL_ECOL6 |
1200.0 | A,B,C,D,E,F,G,H,I,J,K,L | ATP synthase subunit c | B1IX01 | ATPL_ECOLC |
1200.0 | A,B,C,D,E,F,G,H,I,J,K,L | ATP synthase subunit c | P68699 | ATPL_ECOLI |
1200.0 | A,B,C,D,E,F,G,H,I,J,K,L | ATP synthase subunit c | B7NF53 | ATPL_ECOLU |
1200.0 | A,B,C,D,E,F,G,H,I,J,K,L | ATP synthase subunit c | B6I3X4 | ATPL_ECOSE |
1200.0 | A,B,C,D,E,F,G,H,I,J,K,L | ATP synthase subunit c | B1LL64 | ATPL_ECOSM |
1200.0 | A,B,C,D,E,F,G,H,I,J,K,L | ATP synthase subunit c | Q1R4J5 | ATPL_ECOUT |
1200.0 | A,B,C,D,E,F,G,H,I,J,K,L | ATP synthase subunit c | A4WGF0 | ATPL_ENT38 |
1200.0 | A,B,C,D,E,F,G,H,I,J,K,L | ATP synthase subunit c | B7LK82 | ATPL_ESCF3 |
1200.0 | A,B,C,D,E,F,G,H,I,J,K,L | ATP synthase subunit c | B5XZL9 | ATPL_KLEP3 |
1200.0 | A,B,C,D,E,F,G,H,I,J,K,L | ATP synthase subunit c | A6TG41 | ATPL_KLEP7 |
1200.0 | A,B,C,D,E,F,G,H,I,J,K,L | ATP synthase subunit c | P68702 | ATPL_PHOLL |
1200.0 | A,B,C,D,E,F,G,H,I,J,K,L | ATP synthase subunit c | B5EZ01 | ATPL_SALA4 |
1200.0 | A,B,C,D,E,F,G,H,I,J,K,L | ATP synthase subunit c | A9MJR4 | ATPL_SALAR |
1200.0 | A,B,C,D,E,F,G,H,I,J,K,L | ATP synthase subunit c | Q57HX4 | ATPL_SALCH |
1200.0 | A,B,C,D,E,F,G,H,I,J,K,L | ATP synthase subunit c | B5FN38 | ATPL_SALDC |
1200.0 | A,B,C,D,E,F,G,H,I,J,K,L | ATP synthase subunit c | B5QVD7 | ATPL_SALEP |
1200.0 | A,B,C,D,E,F,G,H,I,J,K,L | ATP synthase subunit c | B5RFV8 | ATPL_SALG2 |
1200.0 | A,B,C,D,E,F,G,H,I,J,K,L | ATP synthase subunit c | B4TAX7 | ATPL_SALHS |
1200.0 | A,B,C,D,E,F,G,H,I,J,K,L | ATP synthase subunit c | B4SYD6 | ATPL_SALNS |
1200.0 | A,B,C,D,E,F,G,H,I,J,K,L | ATP synthase subunit c | Q5PKW7 | ATPL_SALPA |
1200.0 | A,B,C,D,E,F,G,H,I,J,K,L | ATP synthase subunit c | A9MXB1 | ATPL_SALPB |
1200.0 | A,B,C,D,E,F,G,H,I,J,K,L | ATP synthase subunit c | C0Q2N7 | ATPL_SALPC |
1200.0 | A,B,C,D,E,F,G,H,I,J,K,L | ATP synthase subunit c | B5BIP1 | ATPL_SALPK |
1200.0 | A,B,C,D,E,F,G,H,I,J,K,L | ATP synthase subunit c | B4TN36 | ATPL_SALSV |
1200.0 | A,B,C,D,E,F,G,H,I,J,K,L | ATP synthase subunit c | P68703 | ATPL_SALTI |
1200.0 | A,B,C,D,E,F,G,H,I,J,K,L | ATP synthase subunit c | P68704 | ATPL_SALTY |
1200.0 | A,B,C,D,E,F,G,H,I,J,K,L | ATP synthase subunit c | B2TUN8 | ATPL_SHIB3 |
1200.0 | A,B,C,D,E,F,G,H,I,J,K,L | ATP synthase subunit c | Q31UN7 | ATPL_SHIBS |
1200.0 | A,B,C,D,E,F,G,H,I,J,K,L | ATP synthase subunit c | Q329S6 | ATPL_SHIDS |
1200.0 | A,B,C,D,E,F,G,H,I,J,K,L | ATP synthase subunit c | Q0SYT9 | ATPL_SHIF8 |
1200.0 | A,B,C,D,E,F,G,H,I,J,K,L | ATP synthase subunit c | P68705 | ATPL_SHIFL |
1200.0 | A,B,C,D,E,F,G,H,I,J,K,L | ATP synthase subunit c | Q3YVP1 | ATPL_SHISS |
1200.0 | A,B,C,D,E,F,G,H,I,J,K,L | ATP synthase subunit c | Q2NQ91 | ATPL_SODGM |
1200.0 | A,B,C,D,E,F,G,H,I,J,K,L | ATP synthase subunit c | A7FPE5 | ATPL_YERP3 |
1200.0 | A,B,C,D,E,F,G,H,I,J,K,L | ATP synthase subunit c | Q1C090 | ATPL_YERPA |
1200.0 | A,B,C,D,E,F,G,H,I,J,K,L | ATP synthase subunit c | B2K842 | ATPL_YERPB |
1200.0 | A,B,C,D,E,F,G,H,I,J,K,L | ATP synthase subunit c | P68706 | ATPL_YERPE |
1200.0 | A,B,C,D,E,F,G,H,I,J,K,L | ATP synthase subunit c | A9R5U4 | ATPL_YERPG |
1200.0 | A,B,C,D,E,F,G,H,I,J,K,L | ATP synthase subunit c | Q1CCH0 | ATPL_YERPN |
1200.0 | A,B,C,D,E,F,G,H,I,J,K,L | ATP synthase subunit c | A4TSI8 | ATPL_YERPP |
1200.0 | A,B,C,D,E,F,G,H,I,J,K,L | ATP synthase subunit c | Q663Q3 | ATPL_YERPS |
1200.0 | A,B,C,D,E,F,G,H,I,J,K,L | ATP synthase subunit c | B1JR36 | ATPL_YERPY |
1184.4000000000003 | A,B,C,D,E,F,G,H,I,J,K,L | ATP synthase subunit c | B2VCA9 | ATPL_ERWT9 |
1184.4000000000003 | A,B,C,D,E,F,G,H,I,J,K,L | ATP synthase subunit c | A1JTD2 | ATPL_YERE8 |
1184.4000000000003 | A,B,C,D,E,F,G,H,I,J,K,L | ATP synthase subunit c | C5BF35 | ATPL_EDWI9 |
1184.4000000000003 | A,B,C,D,E,F,G,H,I,J,K,L | ATP synthase subunit c | A8G7M3 | ATPL_SERP5 |
1170.0 | A,B,C,D,E,F,G,H,I,J,K,L | ATP synthase subunit c | B4F0E2 | ATPL_PROMH |
1154.4000000000003 | A,B,C,D,E,F,G,H,I,J,K,L | ATP synthase subunit c | Q6CYJ0 | ATPL_PECAS |
1154.4000000000003 | A,B,C,D,E,F,G,H,I,J,K,L | ATP synthase subunit c | C6DJG7 | ATPL_PECCP |
1138.8 | A,B,C,D,E,F,G,H,I,J,K,L | ATP synthase subunit c | A0KQY3 | ATPL_AERHH |
94.4 | M | ATP synthase subunit c | C5BF34 | ATP6_EDWI9 |
94.4 | M | ATP synthase subunit c | Q2NQ92 | ATP6_SODGM |
93.2 | M | ATP synthase subunit c | B2VCB0 | ATP6_ERWT9 |
91.0 | M | ATP synthase subunit c | A8G7M2 | ATP6_SERP5 |
90.4 | M | ATP synthase subunit c | A7FPE6 | ATP6_YERP3 |
90.4 | M | ATP synthase subunit c | Q1C089 | ATP6_YERPA |
90.4 | M | ATP synthase subunit c | B2K841 | ATP6_YERPB |
90.4 | M | ATP synthase subunit c | Q7CFM3 | ATP6_YERPE |
90.4 | M | ATP synthase subunit c | Q1CCG9 | ATP6_YERPN |
90.4 | M | ATP synthase subunit c | A4TSI7 | ATP6_YERPP |
90.4 | M | ATP synthase subunit c | Q663Q2 | ATP6_YERPS |
90.4 | M | ATP synthase subunit c | B1JR35 | ATP6_YERPY |
90.4 | M | ATP synthase subunit c | A1JTD4 | ATP6_YERE8 |