Thermodynamic stability of wild-type and mutant p53 core domain.


Abstract

Some 50% of human cancers are associated with mutations in the core domain of the tumor suppressor p53. Many mutations are thought just to destabilize the protein. To assess this and the possibility of rescue, we have set up a system to analyze the stability of the core domain and its mutants. The use of differential scanning calorimetry or spectroscopy to measure its melting temperature leads to irreversible denaturation and aggregation and so is useful as only a qualitative guide to stability. There are excellent two-state denaturation curves on the addition of urea that may be analyzed quantitatively. One Zn2+ ion remains tightly bound in the holo-form of p53 throughout the denaturation curve. The stability of wild type is 6.0 kcal (1 kcal = 4.18 kJ)/mol at 25 degrees C and 9.8 kcal/mol at 10 degrees C. The oncogenic mutants R175H, C242S, R248Q, R249S, and R273H are destabilized by 3.0, 2.9, 1.9, 1.9, and 0.4 kcal/mol, respectively. Under certain denaturing conditions, the wild-type domain forms an aggregate that is relatively highly fluorescent at 340 nm on excitation at 280 nm. The destabilized mutants give this fluorescence under milder denaturation conditions. Study holds ProTherm entries: 3045, 3046, 3047, 3048, 3049, 3050, 3051 Extra Details: thermodynamic stability; p53 core domain; tumor suppressor;,fluorescence; calorimetry

Submission Details

ID: BAAcHpTe3

Submitter: Connie Wang

Submission Date: April 24, 2018, 8:20 p.m.

Version: 1

Publication Details
Bullock AN;Henckel J;DeDecker BS;Johnson CM;Nikolova PV;Proctor MR;Lane DP;Fersht AR,Proc. Natl. Acad. Sci. U.S.A. (1997) Thermodynamic stability of wild-type and mutant p53 core domain. PMID:9405613
Additional Information

Structure view and single mutant data analysis

Study data

No weblogo for data of varying length.
Colors: D E R H K S T N Q A V I L M F Y W C G P
 

Data Distribution

Studies with similar sequences (approximate matches)

Correlation with other assays (exact sequence matches)


Relevant UniProtKB Entries

Percent Identity Matching Chains Protein Accession Entry Name
300.0 A,B,C Cellular tumor antigen p53 P04637 P53_HUMAN
291.6 A,B,C Cellular tumor antigen p53 P13481 P53_CHLAE
290.4 A,B,C Cellular tumor antigen p53 P56423 P53_MACFA
290.4 A,B,C Cellular tumor antigen p53 P61260 P53_MACFU
290.4 A,B,C Cellular tumor antigen p53 P56424 P53_MACMU
283.5 A,B,C Cellular tumor antigen p53 Q95330 P53_RABIT
276.6 A,B,C Cellular tumor antigen p53 Q64662 P53_OTOBE
277.79999999999995 A,B,C Cellular tumor antigen p53 O36006 P53_MARMO
272.4 A,B,C Cellular tumor antigen p53 Q9TTA1 P53_TUPBE
277.79999999999995 A,B,C Cellular tumor antigen p53 P79892 P53_HORSE
277.5 A,B,C Cellular tumor antigen p53 Q29480 P53_EQUAS