The equilibrium and kinetics of folding of hen egg-white lysozyme were studied by means of CD spectroscopy in the presence of varying concentrations of ethanol under acidic condition. The equilibrium transition curves of guanidine hydrochloride-induced unfolding in 13 and 26% (v/v) ethanol have shown that the unfolding significantly deviates from a two-state mechanism. The kinetics of denaturant-induced refolding and unfolding of hen egg-white lysozyme were investigated by stopped-flow CD at three ethanol concentrations: 0, 13, and 26% (v/v). Immediately after dilution of the denaturant, the refolding curves showed a biphasic time course in the far-UV region, with a burst phase with a significant secondary structure and a slower observable phase. However, when monitored by the near-UV CD, the burst phase was not observed and all refolding kinetics were monophasic. To clarify the effect of nonnative secondary structure induced by the addition of ethanol on the folding/unfolding kinetics, the kinetic m values were estimated from the chevron plots obtained for the three ethanol concentrations. The data indicated that the folding/unfolding kinetics of hen lysozyme in the presence of varying concentrations of ethanol under acidic condition is explained by a model with both on-pathway and off-pathway intermediates of protein folding. Study holds ProTherm entries: 22033, 22034, 22035, 22036, 22037 Extra Details: protein folding; lysozyme; ethanol; kinetic intermediate; nonnative state
ID: 4uWFCnnj3
Submitter: Connie Wang
Submission Date: April 24, 2018, 8:53 p.m.
Version: 1
Number of data points | 10 |
Proteins | Lysozyme C ; Lysozyme C |
Unique complexes | 1 |
Assays/Quantities/Protocols | Experimental Assay: m ; Experimental Assay: dG_H2O |
Libraries | Mutations for sequence KVFGRCELAAAMKRHGLDNYRGYSLGNWVCAAKFESNFNTQATNRNTDGSTDYGILQINSRWWCNDGRTPGSRNLCNIPCSALLSSDITASVNCAKKIVSDGNGMNAWVAWRNRCKGTDVQAWIRGCRL |
Colors: | D | E | R | H | K | S | T | N | Q | A | V | I | L | M | F | Y | W | C | G | P |
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Percent Identity | Matching Chains | Protein | Accession | Entry Name |
---|---|---|---|---|
100.0 | Lysozyme C | P00698 | LYSC_CHICK | |
96.9 | Lysozyme C | P00700 | LYSC_COLVI | |
96.9 | Lysozyme C | P00699 | LYSC_CALCC | |
96.9 | Lysozyme C | Q7LZQ0 | LYSC_CATWA | |
96.9 | Lysozyme C | Q7LZP9 | LYSC_LOPIM | |
96.1 | Lysozyme C | Q7LZI3 | LYSC_TRASA | |
95.3 | Lysozyme C | P00701 | LYSC_COTJA | |
96.1 | Lysozyme C | P19849 | LYSC_PAVCR | |
95.3 | Lysozyme C | P22910 | LYSC_CHRAM | |
95.3 | Lysozyme C | Q7LZT2 | LYSC_TRATE | |
95.2 | Lysozyme C | P00703 | LYSC_MELGA | |
92.2 | Lysozyme C | P00704 | LYSC_NUMME | |
93.0 | Lysozyme C | P24364 | LYSC_LOPLE | |
94.6 | Lysozyme C | P24533 | LYSC_SYRRE | |
93.2 | Lysozyme C | P00702 | LYSC_PHACO | |
93.0 | Lysozyme C | P81711 | LYSC_SYRSO | |
92.3 | Lysozyme C | P49663 | LYSC_PHAVE |